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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016715.1_1931_2054_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1931 - 2054

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGCGTGGG

5'SS Class:

major

3'SS Sequence:

GTCCCCGTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTGAC

U12 Branch Point Sequence:

GTCTCCTTGTCC

Flanking Amino Acid:

VGYIEENAKPGTSVMTVNAT

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.1

54.2

Major BPS

48.3

-0.1

1.3

40.8

41.4

Major PPT

61.5

0.26

1.1

53.4

41.5

Minor 5ss

25.1

-2.9

3.1

22.5

37.5

Minor BPS

47.3

-0.2

3.5

70.44

41.4

Associated Gene:

Gene:

CDH1

Ensembl Gene ID:

ENSAPLG00000003035

Chromosome:

PEDO01016715.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035220

183 - 2650

2468

ENSAPLT00000018267

3 - 2629

2627

ENSAPLT00000003106

3 - 2617

2615