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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016715.1_2200_2270_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2200 - 2270

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTC|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

GGTGCCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

ACGCCACTGACG

Flanking Amino Acid:

LDREEIEKYVIFSHAVSANG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.3

55.8

43.4

Major BPS

61.3

0.28

52.7

34.2

Major PPT

63.3

0.3

0.9

54.8

36.5

Minor 5ss

28.2

-2.5

3.1

31.7

36.8

Minor BPS

42.8

-0.7

1.9

44.45

41.2

Associated Gene:

Gene:

CDH1

Ensembl Gene ID:

ENSAPLG00000003035

Chromosome:

PEDO01016715.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018267

3 - 2629

2627

ENSAPLT00000003106

3 - 2617

2615