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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016741.1_1977_2153_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1977 - 2153

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

CTGCCCCTGATG

Flanking Amino Acid:

WRNFLQSHNRVKVTLDQRTA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

80.2

0.68

0.8

73.8

31.3

Minor 5ss

34.9

-1.7

3.5

48.2

47.9

Minor BPS

-0.3

1.8

52.5

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029726

Chromosome:

PEDO01016741.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038417

1246 - 3303

2058

ENSAPLT00000020096

1246 - 4508

3263