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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016741.1_2187_2344_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2187 - 2344

Intron Length:

158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

TGGGCTGTGACC

Flanking Amino Acid:

AKLKKQAAEQAWRNFLQSHN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

81.3

32.8

Major BPS

0.22

1.2

52.4

43.3

Major PPT

81.7

0.71

0.7

72.7

32.1

Minor 5ss

32.7

-2

3.4

40.8

45.4

Minor BPS

46.5

-0.2

2.1

57.52

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029726

Chromosome:

PEDO01016741.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038417

1246 - 3303

2058

ENSAPLT00000020096

1246 - 4508

3263