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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016741.1_2845_3077_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2845 - 3077

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

TGATCATGCATT

Flanking Amino Acid:

PFPVELKAVLDEKNVRLAHY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.7

34.4

Major BPS

0.57

1.2

41.2

Major PPT

92.1

0.95

0.6

87.8

22.1

Minor 5ss

31.4

-2.1

3.2

35.2

41.4

Minor BPS

46.3

-0.2

2.1

68.07

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029726

Chromosome:

PEDO01016741.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020096

1246 - 4508

3263

ENSAPLT00000038417

1246 - 3303

2058