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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016741.1_3226_4487_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3226 - 4487

Intron Length:

1262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTCAT

U12 Branch Point Sequence:

TGGTCATGCATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.7

34.4

Major BPS

69.7

0.49

1.3

71.4

45.1

Major PPT

92.2

0.95

0.6

88.1

21.7

Minor 5ss

31.4

-2.1

3.2

35.2

41.4

Minor BPS

-0.2

2.1

66.84

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029726

Chromosome:

PEDO01016741.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020096

1246 - 4508

3263