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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016744.1_3730_3860_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3730 - 3860

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

TGGGGTGCCCAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCTCAG

U12 Branch Point Sequence:

GGGGGCTCAGGG

Flanking Amino Acid:

EAEGPCTNHWLVGAATCAER

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

71.6

40.2

Major BPS

45.3

-0.3

1.7

51.1

46.3

Major PPT

48.4

-0

1.1

41.1

43.3

Minor 5ss

39.2

-1.2

2.8

41.9

44.5

Minor BPS

32.4

-1.4

2.1

28.67

41.5

Associated Gene:

Gene:

NAGK

Ensembl Gene ID:

ENSAPLG00000020637

Chromosome:

PEDO01016744.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033101

2134 - 5947

3814

ENSAPLT00000022687

2134 - 5947

3814