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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016744.1_3960_4035_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3960 - 4035

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

CCCGTGGTGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGGTGAC

U12 Branch Point Sequence:

CCCTGGGTGACG

Flanking Amino Acid:

VDPKVPLRSLGLSLSGGDQE

Intron Amino Acid Position:

471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

58.5

40.7

Major BPS

45.4

-0.2

1.4

34.5

43.7

Major PPT

57.8

0.18

1.1

52.2

41.6

Minor 5ss

33.8

-1.8

40.2

39.7

Minor BPS

34.2

-1.3

2.7

37.07

Associated Gene:

Gene:

NAGK

Ensembl Gene ID:

ENSAPLG00000020637

Chromosome:

PEDO01016744.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033101

2134 - 5947

3814

ENSAPLT00000022687

2134 - 5947

3814