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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016744.1_4775_5059_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4775 - 5059

Intron Length:

285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGGCAC

5'SS Class:

major

3'SS Sequence:

CTCTCGGAGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CCGTCCCCATCC

Flanking Amino Acid:

FAGFCQILAAGAQAGDPLCC

Intron Amino Acid Position:

622

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.2

54.9

44.4

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

0.16

1.1

49.8

43.1

Minor 5ss

29.2

-2.4

3.5

32.5

42.6

Minor BPS

43.1

-0.5

2.1

50.9

45.8

Associated Gene:

Gene:

NAGK

Ensembl Gene ID:

ENSAPLG00000020637

Chromosome:

PEDO01016744.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033101

2134 - 5947

3814

ENSAPLT00000022687

2134 - 5947

3814