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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016744.1_5158_5437_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5158 - 5437

Intron Length:

280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

GCTCCCCACGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAC

U12 Branch Point Sequence:

TGCTCCCCACGC

Flanking Amino Acid:

VVAVLPKIHESLFQGDLGLP

Intron Amino Acid Position:

655

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

35.2

Major BPS

49.9

-0

1.3

60.3

37.5

Major PPT

64.9

0.34

0.9

58.2

Minor 5ss

26.7

-2.7

3.3

38.5

46.6

Minor BPS

40.4

-0.7

2.2

45.1

Associated Gene:

Gene:

NAGK

Ensembl Gene ID:

ENSAPLG00000020637

Chromosome:

PEDO01016744.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033101

2134 - 5947

3814

ENSAPLT00000022687

2134 - 5947

3814