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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016744.1_5517_5690_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5517 - 5690

Intron Length:

174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TCCCCTTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTCCAT

U12 Branch Point Sequence:

CCCCCCAAAACC

Flanking Amino Acid:

VWNSWDLMKEGFVRVLAQAR

Intron Amino Acid Position:

681

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

52.4

0.06

1.3

41.7

Major PPT

72.1

0.5

0.9

68.3

31.9

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

45.5

-0.3

52.37

Associated Gene:

Gene:

NAGK

Ensembl Gene ID:

ENSAPLG00000020637

Chromosome:

PEDO01016744.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022687

2134 - 5947

3814