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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016787.1_349_565_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

349 - 565

Intron Length:

217

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCG|GCACCGCTG

5'SS Class:

weak_major

3'SS Sequence:

TCCCCGCAGCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CCGTCCTCACTG

Flanking Amino Acid:

APKKRPRPRAAEAEAIEKEL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.6

0.16

1.4

50.6

Major BPS

72.4

0.56

73.5

32.5

Major PPT

48.4

-0

1.1

44.7

35.8

Minor 5ss

-2.4

4.4

46.9

48.5

Minor BPS

46.2

-0.4

1.9

46.61

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028088

Chromosome:

PEDO01016787.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020532

286 - 1013

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