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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016803.1_2323_2558_R

Intron Information:

Intron Rank:

136724

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2323 - 2558

Intron Length:

236

Sequence Information:

Terminal Dinucleotides:

GT-TG

5'SS Sequence:

TTT|GTGGTTTTT

5'SS Class:

weak_major

3'SS Sequence:

TTATTGGGGTTTG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTTTATTTATAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.9

0.12

1.1

62.4

38.3

Major BPS

88.7

0.96

0.8

36.5

Major PPT

35.5

-0.8

3.1

50.6

47.8

Minor 5ss

41.9

-0.9

3.3

63.1

42.9

Minor BPS

52.1

-0

1.9

65.55

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021003

Chromosome:

PEDO01016803.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018041

408 - 3070

2663