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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016818.1_35906_36137_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
35906 - 36137

Intron Length:
232

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCT|GTGAGTGCC

5'SS Class:
major

3'SS Sequence:
TGTTTGTCACCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTCTAAC

U12 Branch Point Sequence:
GTGTGTCTAACA

Flanking Amino Acid:
EDILGKMAVSIVRALEHLHS

Intron Amino Acid Position:
174

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.5
0.46
1.1
62.6
36.1

Major BPS
66.8
0.42
1.2
69.6
35.5

Major PPT
74.1
0.54
1
67
43.8

Minor 5ss
31.4
-2.1
3.2
45.9
42.3

Minor BPS
49.1
-0
2.1
64.47
42.1

Associated Gene:

Gene:
MAP2K3

Ensembl Gene ID:

Chromosome:
PEDO01016818.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

28646 - 45146
16501

31972 - 45146
13175