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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016829.1_2165_2410_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2165 - 2410

Intron Length:

246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCTTT

5'SS Class:

major

3'SS Sequence:

TTTGGTGGGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

CTTTTCTGACCC

Flanking Amino Acid:

SPPATSSTTWERRRRSR*WM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

74.8

38.1

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

60.5

0.24

1.2

53.8

49.8

Minor 5ss

43.9

-0.7

3.1

56.2

Minor BPS

57.6

0.22

1.8

70.43

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026704

Chromosome:

PEDO01016829.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023124

21 - 4536

4516