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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016829.1_440_960_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

440 - 960

Intron Length:

521

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTGCT

5'SS Class:

major

3'SS Sequence:

CCTCACCCTATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

ACGTCCTCACCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

35.8

Major BPS

74.9

0.62

81.3

29.9

Major PPT

0.43

0.8

61.6

28.7

Minor 5ss

32.1

-2

3.3

47.2

42.3

Minor BPS

51.1

0.01

1.9

60.73

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026704

Chromosome:

PEDO01016829.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023124

21 - 4536

4516