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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016839.1_1634_2255_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1634 - 2255

Intron Length:

622

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCTCTTCCC

5'SS Class:

weak_major

3'SS Sequence:

CGGGGGCTTGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

TCGTGTCTACAT

Flanking Amino Acid:

PGAGQRGREMMRLILAGKAG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.3

0.03

1.4

52.3

42.7

Major BPS

70.2

0.5

1.1

77.2

Major PPT

45.2

-0.2

1.7

42.2

43.2

Minor 5ss

20.7

-3.4

3.5

26.2

28.6

Minor BPS

40.1

-0.6

2.2

56.93

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024911

Chromosome:

PEDO01016839.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038192

1574 - 3023

1450