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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016853.1_4905_5201_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4905 - 5201

Intron Length:

297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

TGCGTCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

ATCCCTCTAACA

Flanking Amino Acid:

QLLAEAEFLGGELLGAPVSG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

72.3

0.55

73.3

28.9

Major PPT

72.5

0.51

0.9

62.3

39.8

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

57.5

0.23

1.7

67.95

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030461

Chromosome:

PEDO01016853.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043797

4766 - 7227

2462