Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016875.1_2058_2260_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2058 - 2260

Intron Length:

203

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCGTGC

5'SS Class:

major

3'SS Sequence:

TTCCCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGGAAT

U12 Branch Point Sequence:

CCCCAAGGAATA

Flanking Amino Acid:

LDYVAKLAAEAPAQYDAVMF

Intron Amino Acid Position:

552

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.36

1.3

55.9

44.3

Major BPS

47.2

-0.1

1.4

53.4

40.4

Major PPT

85.5

0.8

0.7

80.4

24.9

Minor 5ss

41.6

-0.9

3.4

59.3

45.4

Minor BPS

-1.2

35.28

Associated Gene:

Gene:

EEF1AKNMT

Ensembl Gene ID:

ENSAPLG00000004413

Chromosome:

PEDO01016875.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004572

635 - 5345

4711