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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016875.1_2748_2912_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2748 - 2912

Intron Length:
165

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACGCATG

5'SS Class:
strong_major

3'SS Sequence:
TCTTCTCCTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ACCTTAC

U12 Branch Point Sequence:
CTCACCTTACTT

Flanking Amino Acid:
ARLLTPAPPPGQKKRRKDKK

Intron Amino Acid Position:
433

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81
0.73
1
72.9
44.2

Major BPS
60.1
0.25
1
51.3
35.1

Major PPT
87.3
0.84
0.6
85.2
22.3

Minor 5ss
41.9
-0.9
3.1
57
47.3

Minor BPS
58.6
0.35
1.7
71.97
45.5

Associated Gene:

Gene:
EEF1AKNMT

Ensembl Gene ID:

Chromosome:
PEDO01016875.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

635 - 5345
4711