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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016875.1_3109_3350_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
3109 - 3350

Intron Length:
242

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGCCCG

5'SS Class:
strong_major

3'SS Sequence:
GTTCTCCCTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CCCACAG

U12 Branch Point Sequence:
GCTGCCCCACGT

Flanking Amino Acid:
APPGLPARQQVPFLSVGGDI

Intron Amino Acid Position:
368

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.8
0.75
1
62.3
43.9

Major BPS
41.6
-0.5
1.4
46.3
37.5

Major PPT
80.6
0.69
0.8
74
31.1

Minor 5ss
32.7
-2
3
39.3
46.1

Minor BPS
37.6
-0.8
2.2
53.17
47.6

Associated Gene:

Gene:
EEF1AKNMT

Ensembl Gene ID:

Chromosome:
PEDO01016875.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

635 - 5345
4711