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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016900.1_53457_55792_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

53457 - 55792

Intron Length:

2336

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATAGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAA

U12 Branch Point Sequence:

TCCTCTGTGACC

Flanking Amino Acid:

ARKILNKIESGELDPERMGS

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.4

34.2

Major BPS

62.3

0.31

1.4

63.7

43.9

Major PPT

83.1

0.75

0.8

81.4

30.6

Minor 5ss

34.4

-1.8

2.8

42.8

Minor BPS

0.04

2.1

64.72

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018827

Chromosome:

PEDO01016900.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048438

40803 - 58781

17979