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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016900.1_63378_65417_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

3UTR

Intron Coordinates:

63378 - 65417

Intron Length:

2040

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATCATCA

5'SS Class:

weak_major

3'SS Sequence:

TCCTGTCACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAA

U12 Branch Point Sequence:

CCTTACTCAATA

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.2

36.8

Major BPS

77.9

0.69

0.8

77.9

25.8

Major PPT

69.6

0.44

0.9

61.5

39.2

Minor 5ss

49.9

-0

2.5

66.2

44.7

Minor BPS

54.7

0.15

1.8

64.29

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030395

Chromosome:

PEDO01016900.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026442

62487 - 75267

12781