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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016913.1_375_462_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

375 - 462

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGCACT

5'SS Class:

major

3'SS Sequence:

ATCCCATCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCCCAT

U12 Branch Point Sequence:

ATTTCCCCAAAA

Flanking Amino Acid:

EELKSELAKEKWRPFCLRFE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

71.4

40.3

Major BPS

63.5

0.33

1.2

72.5

34.6

Major PPT

68.2

0.41

0.9

58.6

36.7

Minor 5ss

35.2

-1.7

3.2

Minor BPS

54.4

0.13

72.87

38.1

Associated Gene:

Gene:

PBDC1

Ensembl Gene ID:

ENSAPLG00000013569

Chromosome:

PEDO01016913.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014132

52 - 1026

975