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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016913.1_859_945_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

859 - 945

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCGTGAGGA

5'SS Class:

major

3'SS Sequence:

CCCCATGGGACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCCCAT

U12 Branch Point Sequence:

TTTCCCCCCATG

Flanking Amino Acid:

VYNSAKEPARGQEEAGQRRA

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.7

0.28

1.3

41.8

Major BPS

48.9

-0

1.3

39.1

Major PPT

52.7

0.06

1.1

47.6

Minor 5ss

19.7

-3.5

3.8

20.1

37.8

Minor BPS

-0.6

2.2

58.01

43.6

Associated Gene:

Gene:

PBDC1

Ensembl Gene ID:

ENSAPLG00000013569

Chromosome:

PEDO01016913.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014132

52 - 1026

975