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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016938.1_3079_3192_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3079 - 3192

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCTG

5'SS Class:

major

3'SS Sequence:

TTTTGGGAGGTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

GCCTCCTCACGA

Flanking Amino Acid:

LSDDELNYFQKSCFGNPLAP

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

72.4

0.56

73.5

32.5

Major PPT

58.3

0.19

1.1

54.9

44.9

Minor 5ss

-1.9

3.6

46.2

49.1

Minor BPS

44.5

-0.4

2.1

51.68

46.1

Associated Gene:

Gene:

RHOT2

Ensembl Gene ID:

ENSAPLG00000003587

Chromosome:

PEDO01016938.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003741

1284 - 9775

8492