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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016938.1_3302_3516_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3302 - 3516

Intron Length:

215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTACCAGCA

5'SS Class:

weak_major

3'SS Sequence:

GTCTCTCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAG

U12 Branch Point Sequence:

GCTGTCTGAGCC

Flanking Amino Acid:

GVQDNGLTLNGFLFLNTLFI

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.1

0.19

1.3

51.1

40.3

Major BPS

49.8

-0

1.7

51.1

46.3

Major PPT

0.56

0.8

68.7

31.9

Minor 5ss

35.7

-1.6

3.5

48.2

47.4

Minor BPS

46.9

-0.2

1.8

55.34

42.9

Associated Gene:

Gene:

RHOT2

Ensembl Gene ID:

ENSAPLG00000003587

Chromosome:

PEDO01016938.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003741

1284 - 9775

8492