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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016938.1_3638_4439_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3638 - 4439

Intron Length:

802

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGCGTGTC

5'SS Class:

major

3'SS Sequence:

TCTCTCCCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

AGCTGCTCACTG

Flanking Amino Acid:

LELTDDYLHPQFRLPPGCSS

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.1

60.9

38.4

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

73.4

0.53

0.9

69.7

31.1

Minor 5ss

32.9

-1.9

3.5

48.3

42.1

Minor BPS

40.8

-0.8

2.1

42.23

43.2

Associated Gene:

Gene:

RHOT2

Ensembl Gene ID:

ENSAPLG00000003587

Chromosome:

PEDO01016938.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003741

1284 - 9775

8492