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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016938.1_4525_5434_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4525 - 5434

Intron Length:

910

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCACC

5'SS Class:

major

3'SS Sequence:

CCGTGTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GGCTGCTGACTC

Flanking Amino Acid:

LQRLFEKHDKDQDGALSPTE

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

65.8

40.2

Major BPS

66.3

0.4

1.1

41.8

Major PPT

70.4

0.46

60.6

44.8

Minor 5ss

33.8

-1.8

3.1

43.2

44.2

Minor BPS

42.4

-0.5

48.33

41.7

Associated Gene:

Gene:

RHOT2

Ensembl Gene ID:

ENSAPLG00000003587

Chromosome:

PEDO01016938.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003741

1284 - 9775

8492