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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016938.1_5581_5678_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5581 - 5678

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGCTCA

5'SS Class:

major

3'SS Sequence:

TCCGCCTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGGCAC

U12 Branch Point Sequence:

CACCCCCCGACC

Flanking Amino Acid:

LSLHGFLCQWTLVAYLDVRH

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.3

68.6

39.2

Major BPS

1.5

63.1

44.5

Major PPT

74.8

0.56

0.8

65.2

36.2

Minor 5ss

45.5

-0.5

2.7

56.2

41.6

Minor BPS

43.8

-0.5

1.8

49.47

40.6

Associated Gene:

Gene:

RHOT2

Ensembl Gene ID:

ENSAPLG00000003587

Chromosome:

PEDO01016938.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003741

1284 - 9775

8492