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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016938.1_6395_6534_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6395 - 6534

Intron Length:

140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTGAGTCGG

5'SS Class:

major

3'SS Sequence:

CCTCCTGCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGCCAC

U12 Branch Point Sequence:

GTGTCCTTTCCC

Flanking Amino Acid:

QVNGQEKYLILYEVSADTKF

Intron Amino Acid Position:

373

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.47

55.2

43.7

Major BPS

43.9

-0.3

1.4

49.9

45.3

Major PPT

74.1

0.54

0.9

64.8

36.4

Minor 5ss

-2.3

2.8

33.9

36.3

Minor BPS

44.1

-0.4

3.6

67.37

44.2

Associated Gene:

Gene:

RHOT2

Ensembl Gene ID:

ENSAPLG00000003587

Chromosome:

PEDO01016938.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003741

1284 - 9775

8492