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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016952.1_10408_15396_R

Intron Information:

Intron Rank:

152373

Intron Class:

major

Intron Phase:

Intron Coordinates:

10408 - 15396

Intron Length:

4989

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGATCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTGTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TGAAATTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

73.1

31.9

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

79.9

0.67

0.8

37.4

Minor 5ss

44.3

-0.6

2.8

57.2

47.1

Minor BPS

47.5

-0.1

1.7

63.37

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029581

Chromosome:

PEDO01016952.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023702

10124 - 16289

6166