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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016990.1_1320_1935_R

Intron Information:

Intron Rank:

133321

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1320 - 1935

Intron Length:

616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTGCCCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

CTCCCTCTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

75.8

35.2

Major BPS

0.3

62.3

30.4

Major PPT

59.8

0.22

1.1

56.5

39.1

Minor 5ss

30.6

-2.2

2.9

Minor BPS

49.3

0.02

1.8

67.15

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018971

Chromosome:

PEDO01016990.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042303

887 - 3350

2464