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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016992.1_19704_19790_F


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
19704 - 19790

Intron Length:
87

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCG|GTGAGCGGG

5'SS Class:
major

3'SS Sequence:
GTCTGCCCTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CACTCAC

U12 Branch Point Sequence:
TTGCCACTCACC

Flanking Amino Acid:
CSMCGRAYTSETYLMKHMSK

Intron Amino Acid Position:
380

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.9
0.54
1.1
54.4
44.7

Major BPS
64.9
0.37
1
67
29.8

Major PPT
73.7
0.53
0.9
66.1
35.9

Minor 5ss
30.8
-2.2
3.3
38.2
46.7

Minor BPS
44.8
-0.4
2.3
61.98
42.8

Associated Gene:

Gene:
ZNF362

Ensembl Gene ID:

Chromosome:
PEDO01016992.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8366 - 19907
11542

8507 - 20671
12165