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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01016992.1_24029_24123_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24029 - 24123

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CTCCGTCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCGAG

U12 Branch Point Sequence:

AGCTCCGAGGCC

Flanking Amino Acid:

PTLSKDTKKQTPVSLPTGSV

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

-0.4

1.6

41.5

41.3

Major PPT

75.6

0.58

0.8

68.9

31.6

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

30.9

-1.5

3.7

48.01

42.3

Associated Gene:

Gene:

PHC2

Ensembl Gene ID:

ENSAPLG00000006579

Chromosome:

PEDO01016992.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006816

23483 - 24997

1515