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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017017.1_183_235_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

183 - 235

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAA|GCCCGGTGC

5'SS Class:

major

3'SS Sequence:

TGCCCCCCAGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTCCAT

U12 Branch Point Sequence:

GTGCCCTCCATG

Flanking Amino Acid:

TRGQADQCVACAHY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.1

0.29

1.2

54.1

39.9

Major BPS

52.4

0.06

1.3

41.7

Major PPT

47.2

-0.1

1.6

51.6

32.6

Minor 5ss

22.8

-3.1

32.1

36.6

Minor BPS

45.1

-0.5

49.84

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019422

Chromosome:

PEDO01017017.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029150

171 - 2864

2694