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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017017.1_2226_2309_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2226 - 2309

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGACC

5'SS Class:

strong_major

3'SS Sequence:

CACCCCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTAAA

U12 Branch Point Sequence:

CAAACATTAAAC

Flanking Amino Acid:

RDPQRFVVIQNDMIGLPSSM

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

34.7

Major BPS

70.2

0.5

71.6

30.1

Major PPT

64.4

0.32

0.8

30.5

Minor 5ss

32.1

-2

3.3

43.2

44.2

Minor BPS

-0.1

1.8

56.35

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019422

Chromosome:

PEDO01017017.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029150

171 - 2864

2694