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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017017.1_2494_2703_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2494 - 2703

Intron Length:

210

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTTTATTTT

5'SS Class:

weak_major

3'SS Sequence:

GGGGGGGCCAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGGAT

U12 Branch Point Sequence:

AGGTTTTGGATG

Flanking Amino Acid:

RISSTRVPRGGTLQSPPATR

Intron Amino Acid Position:

460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.7

0.23

1.2

65.9

40.3

Major BPS

71.4

0.53

1.4

71.4

45.1

Major PPT

43.6

-0.3

1.1

28.7

36.3

Minor 5ss

47.5

-0.2

2.6

59.4

45.3

Minor BPS

45.8

-0.4

1.4

44.72

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019422

Chromosome:

PEDO01017017.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029150

171 - 2864

2694