Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017017.1_755_837_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

755 - 837

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGGACA

5'SS Class:

major

3'SS Sequence:

CTGTGCCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

ATTTACTCACCT

Flanking Amino Acid:

TMRRLLQETELVEPLTPSGA

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

68.4

38.2

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

73.5

0.53

0.9

66.1

35.8

Minor 5ss

25.7

-2.8

3.1

31.1

42.7

Minor BPS

55.4

0.25

80.01

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019422

Chromosome:

PEDO01017017.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029150

171 - 2864

2694