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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017017.1_961_1038_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

961 - 1038

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

AGCTCCTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CCCTGCTCACCC

Flanking Amino Acid:

GSGAFGTVYKGIWIPDGESV

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.6

33.8

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

72.5

0.51

0.9

62.4

39.2

Minor 5ss

29.7

-2.3

40.4

45.3

Minor BPS

42.8

-0.5

2.2

49.59

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019422

Chromosome:

PEDO01017017.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029150

171 - 2864

2694