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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017099.1_23986_24557_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23986 - 24557

Intron Length:

572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAACAA

5'SS Class:

major

3'SS Sequence:

TCTTTAATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CTTTCTTTAATT

Flanking Amino Acid:

SKQEDIRRKKMCVLRLIHVI

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.1

61.3

39.2

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

83.7

0.76

0.8

77.6

34.4

Minor 5ss

29.6

-2.3

3.3

38.7

46.3

Minor BPS

83.7

1.13

91.31

32.6

Associated Gene:

Gene:

COG2

Ensembl Gene ID:

ENSAPLG00000015967

Chromosome:

PEDO01017099.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016685

170 - 26942

26773