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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017099.1_2455_3778_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2455 - 3778

Intron Length:

1324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGCCTTCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAGAT

U12 Branch Point Sequence:

TTTTTTCCACCT

Flanking Amino Acid:

IPRLYRRTNKEVPTKASPYV

Intron Amino Acid Position:

638

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

1.1

Major BPS

66.3

0.41

37.5

Major PPT

76.8

0.6

0.8

68.7

37.2

Minor 5ss

31.7

-2.1

42.5

44.2

Minor BPS

47.9

-0

2.1

76.16

40.8

Associated Gene:

Gene:

COG2

Ensembl Gene ID:

ENSAPLG00000015967

Chromosome:

PEDO01017099.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016685

170 - 26942

26773