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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017099.1_25653_26446_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

25653 - 26446

Intron Length:

794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GTAATTTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTGTTGTAATT

Flanking Amino Acid:

ADFVNLSTNLVGMDKALNQL

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

0.9

80.7

31.6

Major BPS

84.4

0.85

1.1

34.5

Major PPT

71.3

0.48

0.9

62.8

43.9

Minor 5ss

40.5

-1.1

3.4

59.8

Minor BPS

54.5

0.22

2.1

78.3

39.3

Associated Gene:

Gene:

COG2

Ensembl Gene ID:

ENSAPLG00000015967

Chromosome:

PEDO01017099.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016685

170 - 26942

26773