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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017099.1_26609_26756_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

26609 - 26756

Intron Length:

148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGCCGGG

5'SS Class:

weak_major

3'SS Sequence:

GTTTGGTTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTACAT

U12 Branch Point Sequence:

TTTTGCTTACAT

Flanking Amino Acid:

LCFDKDEFMKPDFDVDHFVS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.7

0.21

1.2

45.1

Major BPS

70.4

0.51

1.1

78.7

33.6

Major PPT

0.65

69.2

46.1

Minor 5ss

34.4

-1.8

3.6

46.4

Minor BPS

0.39

2.1

85.06

41.4

Associated Gene:

Gene:

COG2

Ensembl Gene ID:

ENSAPLG00000015967

Chromosome:

PEDO01017099.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016685

170 - 26942

26773