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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017099.1_4804_5622_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4804 - 5622

Intron Length:

819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTGCT

5'SS Class:

major

3'SS Sequence:

TTTTTTTGTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATATTTATAACA

Flanking Amino Acid:

AADLDKLQEQIPDIIEMVKP

Intron Amino Acid Position:

566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.61

1.1

72.6

36.5

Major BPS

88.7

0.96

0.8

36.5

Major PPT

87.7

0.85

0.8

88.9

28.2

Minor 5ss

37.8

-1.4

51.1

45.4

Minor BPS

61.2

0.35

1.5

71.2

34.3

Associated Gene:

Gene:

COG2

Ensembl Gene ID:

ENSAPLG00000015967

Chromosome:

PEDO01017099.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016685

170 - 26942

26773