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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017099.1_5824_7434_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5824 - 7434

Intron Length:

1611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGATGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

ATTGCTAGGACT

Flanking Amino Acid:

LARYSVFISEVSVRPISSEN

Intron Amino Acid Position:

499

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

80.4

0.68

77.1

41.6

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

47.9

-0

1.9

70.97

Associated Gene:

Gene:

COG2

Ensembl Gene ID:

ENSAPLG00000015967

Chromosome:

PEDO01017099.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016685

170 - 26942

26773