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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017099.1_7587_8494_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7587 - 8494

Intron Length:

908

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACTTT

5'SS Class:

strong_major

3'SS Sequence:

TGATTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTGAC

U12 Branch Point Sequence:

TGTTGCCTGATT

Flanking Amino Acid:

SLSDSLEEAPEGSSYCLLAT

Intron Amino Acid Position:

448

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

81.2

33.8

Major BPS

65.1

0.38

39.5

Major PPT

80.2

0.68

0.9

77.1

41.8

Minor 5ss

49.1

-0.1

73.2

43.7

Minor BPS

51.5

0.13

2.1

76.64

40.1

Associated Gene:

Gene:

COG2

Ensembl Gene ID:

ENSAPLG00000015967

Chromosome:

PEDO01017099.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016685

170 - 26942

26773