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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017142.1_570_1043_F

Intron Information:

Intron Rank:

140146

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

570 - 1043

Intron Length:

474

Sequence Information:

Terminal Dinucleotides:

GT-GG

5'SS Sequence:

TGG|GTTGGGGAC

5'SS Class:

weak_major

3'SS Sequence:

CCCAAAAGTTTGG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCAAAA

U12 Branch Point Sequence:

AGACCCAAAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.6

0.18

1.3

50.4

40.9

Major BPS

47.3

-0.1

50.8

30.3

Major PPT

33.2

-0.9

3.1

39.8

37.7

Minor 5ss

-3

3.4

24.3

37.5

Minor BPS

42.9

-0.4

2.1

58.85

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025371

Chromosome:

PEDO01017142.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034551

480 - 1540

1061