Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017148.1_15028_15118_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15028 - 15118

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGGGACCC

5'SS Class:

major

3'SS Sequence:

CTCCCCGTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGCCAT

U12 Branch Point Sequence:

ATTCCCTGCTCC

Flanking Amino Acid:

GNTLRGSSIFGLAPKKAKDK

Intron Amino Acid Position:

429

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.37

1.1

50.8

40.5

Major BPS

47.8

-0.1

1.6

58.2

48.3

Major PPT

64.2

0.32

56.8

38.7

Minor 5ss

26.9

-2.7

3.2

Minor BPS

-0.8

3.5

63.44

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023745

Chromosome:

PEDO01017148.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024853

12904 - 15752

2849