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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01017160.1_3104_3205_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3104 - 3205

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCCGAAGGC

5'SS Class:

major

3'SS Sequence:

CGAGGAGAAGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGGAGAA

U12 Branch Point Sequence:

CGGCCGAGGAGA

Flanking Amino Acid:

GGFPPAERRELDESRREVIQ

Intron Amino Acid Position:

283

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.3

0.38

1.2

59.6

38.5

Major BPS

42.4

-0.4

1.1

30.2

33.7

Major PPT

-0.6

1.6

25.4

35.4

Minor 5ss

13.8

-4.2

3.7

24.1

37.1

Minor BPS

-1.5

2.1

33.98

35.1

Associated Gene:

Gene:

SLC8A2

Ensembl Gene ID:

ENSAPLG00000022021

Chromosome:

PEDO01017160.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038238

2258 - 4223

1966

ENSAPLT00000017908

2258 - 4445

2188